News · SI
OpenAI's BioBasicsBench tests whether AI agents can read real wet-lab data
OpenAI and enzyme design company Ligo have built BioBasicsBench, 100 routine wet-lab tasks drawn from real experiments, and GPT-6 Astra tops it at 66.7% of available credit, well ahead of GPT-5.6 Sol at 43.8%.

OpenAI has introduced BioBasicsBench, a benchmark that measures how well AI agents handle the routine analysis wet-lab scientists do every day, built with Ligo, a biotech company focused on enzyme design[1]. Its 100 tasks test whether an agent can interpret raw experimental data, identify errors and recognise when the evidence cannot support a conclusion[1].
01 / 04
Real lab data, not paper figures
OpenAI argues that existing benchmarks lean on charts and images selected for scientific papers, which miss the failed experiments, ambiguous images and conflicting observations of real lab work[1]. BioBasicsBench covers five areas: protein methods, imaging and cytometry, quantification and assays, nucleic acid methods, and molecular cloning[1].
Scientists wrote each task from their own experiments, paired with an expert-written grading rubric, and each went through review by a second Ligo scientist, an external PhD-level wet-lab scientist and a final internal check[1]. Inputs include 31 tasks with gels and blots, 14 with microscopy, 12 with sequencing files and 7 with protocol videos, among others[1].
02 / 04
The scores
OpenAI evaluated seven of its own models across 37 model and reasoning effort settings, with five attempts per task, for 18,500 results in total[1]. At the xhigh setting, the results were[1]:
| Model | Mean reward |
|---|---|
| GPT-6 Astra | 66.7% |
| GPT-6.1 Sol | 62.0% |
| GPT-5.6 Sol | 43.8% |
| GPT-6 Luna | 38.3% |
| GPT-5.5 | 35.4% |
| GPT-5.4 | 33.2% |
| GPT-5.2 | 31.2% |
Mean reward is partial rubric credit, not a task success rate. OpenAI says GPT-6 Astra beats GPT-5.6 Sol even at low reasoning effort while using about half the output tokens at xhigh, and puts the gain down largely to stronger native multimodal handling[1]. In one example Astra noticed a negative control plate was labelled with the wrong antibiotic and rejected it, where GPT-5.6 Sol took it at face value[1].
03 / 04
Where it still goes wrong
OpenAI is clear that higher scores do not yet mean models can make reliable judgements in the lab[1]. Its published failure cases show Astra picking the wrong colonies because it assumed a larger PCR product meant successful cloning, discounting microscopy evidence that contradicted its preferred interpretation, and overcounting colonies on a plate by roughly 12%[1].
04 / 04
Why it matters
Everyday lab analysis is where AI science assistants either save researchers time or quietly lead them down the wrong path. A benchmark built from messy, real data is a more honest test than curated figures, though for now it only covers OpenAI's models and one partner lab's experiments. OpenAI also says tracking these capabilities will help it understand their implications for biosafety and biosecurity[1].
Sources
Sources for this story.
FAQ
Frequently asked questions.
01What is BioBasicsBench?
A benchmark of 100 routine wet-lab analysis tasks, built by OpenAI with Ligo, a biotech company focused on enzyme design, that tests whether AI agents can interpret raw experimental data, spot errors and recognise when evidence cannot support a conclusion.
02What kind of data does it use?
Raw lab evidence such as gel and blot images, agar plate photos, microscopy stacks, sequencing reads, plate-reader and flow cytometry exports, and videos of bench work, drawn from the task authors' own experiments.
03Which model scored best?
At the xhigh reasoning setting, GPT-6 Astra earned 66.7% of available credit, followed by GPT-6.1 Sol at 62.0% and GPT-5.6 Sol at 43.8%.
04Were non-OpenAI models tested?
No. OpenAI evaluated seven of its own models across 37 model and reasoning effort settings, with five attempts per task.
05Where do the models still fall short?
OpenAI's examples show GPT-6 Astra letting assumptions override experimental controls, discounting observations that contradict its preferred reading, and overcounting colonies on a plate by about 12%.
That’s the story
Building with what’s new?
Spectrum Web Co ships products, places talent, builds social narratives and builds custom business tools as monthly services.
Related stories